Diagnosis of Autism Spectrum Disorder (ASD) Using Recursive Feature Elimination-Graph Neural Network (RFE-GNN) and Phenotypic Feature Extractor (PFE)

Sensors (Basel). 2023 Dec 6;23(24):9647. doi: 10.3390/s23249647.

Abstract

Autism spectrum disorder (ASD) poses as a multifaceted neurodevelopmental condition, significantly impacting children's social, behavioral, and communicative capacities. Despite extensive research, the precise etiological origins of ASD remain elusive, with observable connections to brain activity. In this study, we propose a novel framework for ASD detection, extracting the characteristics of functional magnetic resonance imaging (fMRI) data and phenotypic data, respectively. Specifically, we employ recursive feature elimination (RFE) for feature selection of fMRI data and subsequently apply graph neural networks (GNN) to extract informative features from the chosen data. Moreover, we devise a phenotypic feature extractor (PFE) to extract phenotypic features effectively. We then, synergistically fuse the features and validate them on the ABIDE dataset, achieving 78.7% and 80.6% accuracy, respectively, thereby showcasing competitive performance compared to state-of-the-art methods. The proposed framework provides a promising direction for the development of effective diagnostic tools for ASD.

Keywords: ABIDE; autism spectrum disorder (ASD); functional magnetic resonance imaging (fMRI); graph neural networks (GNN); multimodal; recursive feature elimination (RFE).

MeSH terms

  • Autism Spectrum Disorder* / diagnostic imaging
  • Brain / diagnostic imaging
  • Brain Mapping
  • Child
  • Communication
  • Humans
  • Magnetic Resonance Imaging
  • Neural Networks, Computer